is it wrong that i want to have my blastoise on my OR from begining cause i had him as a wee squrtile from Fire red and i would like him to be in my OR game

Nope nothing wrong, you shouldn't be hinder on as to how you want to play your own game and how you want to experience it.

If you send it to OR before you get the national dex then it won't be a registered pokemon *the National Pokedex is available after you catch the mascot legendary of either of the Gen 3 remakes*.

Your secret base team is the first three Pokémon in your party when you game sync. As an example, go check out my team at my base. (I posted the QR code earlier)

There is more to the secret base than making it look pretty? o.O

That doesn't stop someone from using it though. I myself am planning to send over a Cleffa egg as soon as I get the game because I've never raised one before.

Just for an example, I'll post my QR code again
http://i.imgur.com/7YsyJ13.jpg
The first three Pokémon in your party when you game sync will be your secret base team.

So for example the first three party members are Walrein, Aggron and Gardevoir theyll be the ones in my secret base when i game sync next?

Yep

Okay thanks. :D
BTW i went to your base, where did you get the Castelia city model? I want one for my base.